NDT Advance Access originally published online on September 9, 2008
Nephrology Dialysis Transplantation 2008 23(12):3752-3761; doi:10.1093/ndt/gfn470
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BK virus large T and VP-1 expression in infected human renal allografts
1 Institute for Pathology, University Hospital Basel, Schönbeinstrasse 40, CH-4003 Basel, Switzerland 2 Institute of Virology, University Hospital Essen, Hufelandstrasse 55, D-45122 Essen, Germany 3 Clinic for Transplantation Immunology and Nephrology, University Hospital Baseland 4 Transplantation Virology, Medical Microbiology, University of Basel, CH-4003 Basel, Switzerland
Correspondence and offprint requests to: Michael J. Mihatsch, Institute for Pathology, University Hospital Basel, Schönbeinstrasse 40, CH-4003 Basel, Switzerland. Tel: +41-61-265-2872; Fax: +41-61-265-3194; E-mail: mjmihatsch{at}uhbs.ch
| Abstract |
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Objective. We investigated the expression of early and late phase BK virus (BKV) proteins and their interactions with host cell proteins in renal allografts, with ongoing polyomavirus associated nephropathy (PVAN), and correlated this with the nuclear and cell morphology.
Methods. Frozen sections from three patients with renal allografts (two biopsies, one explant) with PVAN were analysed by indirect immunofluorescence using BKV specific anti-polyoma large T-antigen and anti-VP-1 antibodies, as well as anti-p53, anti-Ki67, anti-caspase-3, anti-bcl2 and anti-cytokeratin 22 antibodies. Nuclear morphology and size were estimated by DNA Hoechst staining.
Results. In infected tubular cells the early and late phases of infection could be distinguished according to expression of large T-antigen or VP-1. The early phase revealed almost normal nuclear proportions, whereas in later phases nuclear size increased about 2 to 3 fold. Expression of large T-antigen was strongly associated with accumulation of p53 in the nucleus, accompanied by the activation of the cell cycle associated cell protein Ki67. In contrast, expression of BKV VP1 correlated only weakly with p53. Virus dependent cell lysis was due to necrosis, since neither caspase 3 nor nuclear nor cytoskeleton changes indicated apoptosis.
Conclusion. In our selected patients with PVAN a clear distinction between early and late phases was possible, according to the protein expression patterns of BKV markers. Striking nuclear enlargement is only present in the late phase of infection. In the inflammatory setting of PVAN, BKV dependent effects appear to be mediated by the inhibition of p53, resulting in the activation of the cell cycle. We assume that in PVAN similar BKV mechanisms are operative as in certain in vitro systems.
Keywords: BK virus nephropathy; renal transplantation
| Introduction |
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The BK virus (BKV) is a human polyomavirus first isolated from the urine of a kidney transplant patient with ureteric stenosis [1]. A decade ago, BKV received renewed attention as a candidate of human disease and emerged as the principal agent of polyomavirus-associated nephropathy (PVAN) [2–5] eliciting severe dysfunction of renal allografts with progressive graft loss in >90% of cases [5–7]. The emergence of PVAN among kidney transplants coincided with the widespread use of potent immunosuppressive drugs such as tacrolimus and mycophenolate mofetil, thus implicating severely impaired antiviral immunity as a critical factor [8].
In the course of disease, initially, so-called decoy cells, i.e. urothelial or tubular cells with virus inclusion bodies, are present in the urine. Later, renal biopsies show viral cytopathic changes in tubular cells, tubular cell necroses, interstitial inflammation and finally interstitial fibrosis. The definitive diagnosis of PVAN depends on characteristic cytopathic changes such as intranuclear inclusions in tubular epithelial cells and/or detection of BKV large T antigen by immunohistochemistry [3,6,9].
In vitro, the phases of the BKV infectious cycle [10,11] and the interaction of viral proteins with host cell proteins have been studied. However, in vivo and specifically in human renal allografts with ongoing BKV nephropathy, cross-talk between the virus and infected cell has not been systematically addressed. Whether in vitro and in vivo phases are similar is an open question; in this respect the majority of in vitro studies focused on the transforming effects of BKV. A better understanding of the in vivo BKV infectious cycle in PVAN may be of interest for making a more precise diagnosis.
In the present study, we investigated the expression of early (large T-Ag) and late (VP-1) BKV proteins in frozen biopsy sections of a selected group of patients with ongoing BKV nephropathy by immunofluorescence (IF) and compared this with expression of host cellular proteins, such as the tumour suppressor protein p53, the cell cycle-associated protein Ki67, the cytokeratin CK22, the apoptosis marker caspase 3 and the anti-apoptotic protein bcl-2. From these data we estimated the time course of the viral infectious cycle in vivo and the type of virus-dependent cell death.
| Materials and methods |
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In the present study, two biopsies and one explanted kidney allograft from three patients, representing the three different stages of PVAN, were studied by light microscopy in paraffin and by IF in frozen tissue sections. All tissue samples were sufficiently large, each containing >10 glomeruli and several clusters of tubules with infected cells. Cases were selected due to their amount of frozen tissue available in order to perform a large panel of double-labelling IF investigations. The clinical parameters of the patients are presented in Table 1.
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Snap frozen tissue sections (5 µm) were air dried and fixed at room temperature with perjodate-lysine-paraformaldehyde or acetone (for detection of bcl-2). Consecutively, fixed sections were analysed by indirect IF in single and double labelling techniques, utilizing the following antibodies (Tables 2 and 3).
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For detection of the following antigens, the controls indicated were used: (1) p53—urothelial bladder carcinoma, (2) bcl-2 and caspase-3-–T-lymphocytes in tonsilar tissue undergoing apoptosis or expressing bcl-2 and (3) SV40—transformed synovial fibroblasts [12].
As negative controls, we utilized concentration-adjusted non-specific mouse or rabbit IgG to replace the primary antibody.
Double labelling was performed by (i) application of mouse monoclonal antibodies and consecutive staining with Cy3-labelled goat anti-mouse antibodies (red fluorescence), and (ii) administration of rabbit polyclonal or monoclonal antibodies was followed by the 2nd anti-rabbit F(ab)2 fragments labelled with Alexa 488 (green fluorescence). With each double labelling, single staining for each marker was performed on parallel sections.
Stained sections were analysed with a Zeiss fluorescence microscope at a magnification of 250-fold. Overlay of the red, green and blue IF staining was performed with an online video camera (Hammamatsu), adding each signal separately. The resulting pictures were evaluated on the video screen at a 400-fold magnification and afterwards digitalized using the KS300 program.
Quantification of the signals
Three autopsy kidneys without any abnormalities were stained with Hoechst dye 33258, and the nuclear density of all cells present was counted in six high-power fields of the renal cortex. On average, in the cortex 79 (±12) and in the medulla 95 (±4), tubular nuclei were found, resulting in a mean number of nuclei of 87 per HPF. This number was taken to roughly estimate the maximum number of signals that could be obtained in one area of interest.
Since PVAN typically occurs in clusters, only positive areas were evaluated by counting 10 HPF per slide, positioning the affected tubulus in the centre of the HPF. To overcome slide-dependent differences in expression, two to five parallel sections were analysed and the data were pooled (Table 4). The standard deviation (SD) indicates the variability between parallel sections. The expression of BKV large T-antigen and VP1 was correlated with nuclear size measuring the numbers of pixels per nucleus. Double-labelled sections were assessed for nuclear size and expression of viral markers utilizing the KS300 program. On digitalized pictures specific nuclei were replaced by white colour and the number of pixels in the region of interest was determined. More than 100 nuclei per specimen were analysed and the results categorized as (a) no BKV protein expression, (b) expression of large T-antigen only, (c) double labelling of large T-antigen and VP1 and (d) single staining of VP1 protein.
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| Results |
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Characterization of cases with BKV nephropathy
Three cases representing the different stages of PVAN [13] were used (Table 1). The biopsy corresponding to stage A (early/initial PVAN) revealed an early involvement of the medulla (Figure 1A). The tubular cell lesions were so minor that the definite diagnosis was only made after SV40 staining; inflammation and necrosis were minimal. The biopsy of stage B (florid) showed marked viral lesions in the cortex and medulla, necrosis and prominent inflammation, but little tubular atrophy and fibrosis (Figure 1B). The nephrectomy specimen showed end-stage PVAN (stage C: late sclerosing) with viral lesions in cortex and medulla, extensive tubular cell necrosis, minor inflammation and most severe interstitial fibrosis and tubular atrophy (Figure 1C).
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By immunofluorescence (IF), per single section, on average 50–60 large T-antigen positive tubular epithelial nuclei per 10 HPF could be detected (Table 4). Ten HPF corresponded in average to 850 nuclei resulting in 6–7% infected cells in the analysed clusters. VP1 antigens were detected in the nucleus and also in the cytoplasm. In stage C of PVAN, the number of VP1 positive cells was slightly higher than in the two other biopsies corresponding to stages A and B, but did not reveal statistical significance. Accumulation of VP1 was associated with enlarged nuclear size and altered nuclear shape (see below). In addition, and more pronounced in the graft nephrectomy specimen (stage C), cellular debris and tubular casts stained extensively for the VP1 protein, most likely indicating release of BKV virions from lysed cells.
The tumour suppressor protein p53 was expressed on average in 33 of the nuclei per 10 HPF in all three patients, whereas the cell cycle-associated protein Ki67 was present in 100–120 nuclei per 10 HPF in the cases of stages B and C, but was lower in stage A, with only 64 positive nuclei.
Staining for the apoptosis marker caspase 3 and the anti-apoptotic protein bcl-2 was negative in tubular cells; tonsil tissue served as a positive control, with specific signals in lymphocytes. However, bcl-2 was expressed in inflammatory cells adjacent to infected tubuli (Figure 2). The cytokeratin CK22 was strongly expressed in all tubular epithelial cells and the Hoechst dye 33258 showed a regular distribution of nuclear DNA, thereby indicating lack of apoptosis.
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Co-expression of large T-antigen with the tumour-suppressor protein p53 and the cell cycle-associated protein Ki67
Expression of large T-antigen was strongly associated with accumulation of p53 in the nucleus (Figure 2A and B). In 70% (± 0.5%) of T-antigen positive nuclei, a complete overlay with p53 in the nucleus was seen. In 96% of the cells found to express p53, T-antigen was also co-localized, indicating a strong co-expression of T-antigen and p53 in vivo, which is known to be mediated by binding and stabilization.
The cell cycle-associated protein Ki67 was less strongly associated with the expression of T-antigen than p53. On average
60% of T-antigen expressing nuclei also contained the Ki67 protein, but, in contrast to p53, no complete overlay of the two staining patterns in the nucleus was seen. Ki67 positive cells were twice as frequent as T-antigen expressing cells, and >60% of Ki67 positive cells did not co-stain for T-antigen. These cells revealed smaller nuclei than those co-expressing the large T-antigen and most likely correspond to non-BKV-infected cells.
Co-expression of large T-antigen with the virus capsid protein VP1
In the biopsy tissue samples (patients A and B, stages A and B), large T-antigen was expressed twice as frequently as VP1 (Figure 2C and D). In contrast, in patient C (stage C), VP1 expression dominated twofold, suggesting that most of BKV replication was in the late phase. However, irrespective of which BKV protein was dominant, expression of the early phase protein large T and the late phase virus capsid protein VP1 was virtually exclusive. Eighty percent of T-antigen positive cells did not co-stain for the VP1 protein. The remaining 20% of double-stained cells revealed only a partial overlay of these proteins, indicating both a time- and space-dependent separation of expression in vivo, as has been described in vitro.
Co-expression of the virus capsid protein VP1 with p53 and Ki67
Expression of the virus capsid protein was loosely associated with accumulation of p53 in the nucleus (Figure 2C and D). Only 29% of VP1 positive cells expressed p53; a partial overlay in terms of the cellular compartment was seen. The level of co-expression between VP1 and p53 was
10% higher than the co-expression of VP1 and T-antigen, indicating that p53 might be expressed slightly longer within the virus cycle than T-antigen, or that T-antigen binding to p53 was no longer required for p53 expression in this late phase.
The cellcycle-associated protein Ki67 was co-expressed in 50% of the VP1 positive cells. However, Ki67 signals were threefold more frequent than VP1 signals, such that 70% of the Ki67 expressing cells were VP1 negative. In line with the results from the T-antigen and Ki67 studies, the majority of Ki67 expressing cells was negative for viral antigens and probably corresponds to repopulating tubular epithelial cells, without any virus replication.
Co-expression of early and late phase BKV proteins correlates with nuclear size
BKV-antigen negative tubular epithelial cells revealed
1293 pixels (± SEM 46) per nucleus, whereas nuclei expressing the large T-antigen were significantly increased in size by
30% (1676 pixels ± 124) (Figure 3). Nuclei staining positive for VP1 were
70% larger (2427 pixels ± 201), compared to those solely expressing large T-antigen. The size of the large T/VP1 double-stained nuclei (3722 pixel ± 387) was about threefold and the VP1 positive cells about twofold larger, in comparison to control cells. The nuclear size of the different cell types was significantly different from each other [analysis of variance: at least (P < 0.03)].
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Accordingly, nuclear size increases with the course of the virus infection and reaches a maximum upon expression of VP1 and T-antigen in the early replication phase. The decrease in the nuclear size of cells lacking detectable large T-antigen expression, but expressing VP1, could be due to uneven nuclear distribution of both antigens, particularly in the very late phase, with partial release of BK virion.
Investigation of co-expression BKV proteins with the apoptosis marker active caspase 3, the anti-apoptotic protein bcl2 and the cytokeratin CK22
The apoptosis marker activated caspase 3 could not be detected in tubular epithelial cells in any of the tissue specimens examined, but was positive in the appropriate positive controls. In addition, Hoechst dye staining of DNA revealed neither nuclear shrinkage nor apoptotic bodies. In line with the lack of apoptotic tubular epithelial cells, strong expression of the cytokeratin CK22 was observed in the BKV-positive cells. No signs of degradation of cytoskeleton proteins were seen, as would be the case with ongoing apoptosis. The anti-apoptotic protein bcl-2 was also absent in virus-infected tubular cells, but was readily detectable in lymphocytes adjacent to the virus-infected tubuli.
| Discussion |
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Expression of early and late phase BKV proteins and their interaction with host cell proteins was examined in tissue specimens from three renal transplant patients in three different stages with ongoing PVAN.
Specifically, our data show the following:
(1) Infection of the kidney transplants with BKV occurs in our group of investigated patients in clusters, but infected cells are in different phases of the virus cycle in one and the same tubule and in different tubules. In the in vivo situation of PVAN in each cell, a clear distinction between early and late phase infection can be made according to the expression of large T-antigen or VP1. The early phase is associated with nearly normal nuclear size and shape, but in later phases nuclear size increases dramatically, by about two- to threefold, when the nuclear cross-section area is evaluated.
This is fully in line with the recent in vitro data obtained from BKV infection in primary cultures of human tubular kidney epithelial cells and demonstrating a clear distinction of early and late phase [11]. The expression of VP1 correlated strongly with the viral DNA replication, thereby indicating the late phase. These data confirm earlier studies—already performed three decades ago [14,15] investigating BKV replication in monkey-derived kidney cells (Vero), in human a embryonic kidney cell line (HEK294) or human embryonic fibroblasts, which are not host cell targets in vivo. Just recently, Acott et al. [10] utilized Vero cells as a model cell line to establish primary and chronic BKV infection in vitro.
In all of our three cases with PVAN (stages A, B and C), virions were released after cell necrosis and not apoptosis, since activated caspase 3 was absent in infected cells and no nuclear alterations, such as nuclear shrinkage or apoptotic bodies, consistent with ongoing apoptosis, were seen by Hoechst dye. Supporting this concept, CK22 was also strongly expressed in virus-infected cells without any evidence for degradation of the cytoskeleton, typical for apoptosis.
This appears to be in contrast to animal studies of renal-transplanted cynomolgus monkeys with reactivation of the cynomolgus polyoma virus. Here, however, apoptosis affected smooth muscle cells of the ureter and cells of the small intestine. These differences may be explained by the differences in cell type, and by species differences between host and virus.
Our results are consistent with reports by Drachenberg [16] and Nickeleit [17], who analysed the ultra-structural features of BKV nephropathy and described BKV-dependent necrosis in tubular infected cells as the main mechanism of viral lysis.
(2) Utilizing double labelling techniques, our study with three patients in three different stages of PVAN demonstrated a remarkable overlap of large T-antigen and p53 expression. About 70% of large T-antigen positive cells co-stained with p53. In 96% of p53 expressing tubular cells, a complete overlay with T-antigen in the nucleus was detected.
Our findings are in accordance with a recent study from Weinreb et al. [18] showing expression of p53 in tubular cells or bladder mucosa of renal-transplanted patients within cells revealing cytopathic changes or viral intranuclear inclusions. Expression of T-antigen was demonstrated on consecutive sections, but not by double labelling. Accordingly, our study clearly confirms the association of p53 and T-antigen and provides, in addition, the precise number of cells co-expressing T-antigen and p53 in PVAN.
Furthermore and intriguingly, 60% of T-antigen positive cells co-stained for the cell cycle-associated protein Ki67. Therefore, we assume that in the course of the BKV infection first T-antigen is expressed, then T-antigen accumulates and inhibits p53 in the nucleus and finally the cell cycle is activated, as can be seen by the Ki67 expression.
Our data give rise to the hypothesis that in vivo similar viral mechanisms control the key cell cycle checkpoint at the G1 to S phase transition, via inhibition of p53 to un-couple the cell cycle. In vitro, BKV T-antigen binds readily to the p53 protein in the cell, thereby inducing growth factor independence, but is, by itself, insufficient to allow anchorage-independent growth [19]. Many studies have addressed the process of neoplastic transformation by T-antigen in rodents or human cell culture systems [20]. In our study, we investigated the natural course of BKV infection in vivo in renal allografts and provide evidence that similar p53 accumulation mechanisms are operative utilizing most likely wild type p53. In vitro data demonstrate that BKV T-antigen binds also to the members of the retinoblastoma family of molecules, thereby affecting cellular growth control [19]. Over-expression of a wild-type p53 has been reported in the case of metastasizing urothelial carcinoma, which was restricted to large T-antigen co-expression and presumably binding [21].
(3) Irrespective of the stage, all our three selected cases revealed the same overlap of expression between T-antigen and p53 and a virtually exclusive T-antigen and VP1 expression. Based on these data, we would like to make a rough hypothetical estimate of the length of the BKV life cycle in vivo (Figure 4). However, this appears to be necessarily preliminary since only three cases have been investigated. Assuming that the induction and binding of p53 by T-antigen would last 3 h [22], which would correspond to the biological minimal induction time of p53 by other noxae (e.g. ionizing irradiation [23]), we could calculate from the 70% overlay of p53 and T-antigen a T-antigen expression period of 10 h (Figure 4). The 20% overlay of VP1 expression and T-antigen would correspond to 2 h co-expression of the viral proteins. Consecutively, VP1 would be expressed for an additional 8 h finally resulting in the lysis of the infected cell. All together, from the start of T-antigen expression to virus-dependent lysis,
16 h are estimated. Taking into account that the period between virus reception and first viral transcriptional activity would last 24–36 h, as described by Low et al., we arrive at a virus life cycle of 40–52 h.
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Intriguingly, this time frame is fully in line with the data from Low et al. [11] when infecting in vitro renal tubular epithelial cells with BKV and detecting progeny virus after 48 h. It is noteworthy, strictly speaking, that the time frame between virus uptake and transcriptional activity given by Low et al. is only valid for the primary infection and could differ in cases of reactivating BKV. Our data, however, support the view that, after expression of T-antigen and activation of the virus transcriptional machinery, BKV is released within the same time limits as for the primary infection, also indicating that novel infection of tubular cells after reactivation occurs within similar time frames.
(4) The Ki67 staining was found in tubular epithelial cells with and without large T-antigen expression. Although the presence of episomal viral DNA in these cells cannot be excluded (BKV infected), significant virus replication does not occur in these cells. Most likely, these proliferating cells correspond to cells repopulating the virus-mediated denudation zones as seen under the light microscope. Ki67-positive cells also staining positive for large T-antigen could either be a subpopulation previously infected or now preferentially infected upon Ki67 expression, which now enter the early phase of the viral replication cycle. Alternatively, Ki67 is actually recruited by, and thus a consequence of, large T expression.
(5) Neither the expression of large T-antigen nor of VP-1 was associated with the apoptosis-associated marker caspase-3, indicating that virus-mediated cell loss in PVAN was due to cytopathic replication and cell lysis and not due to apoptosis. Therefore, necrosis with the corresponding inflammatory response seems to be a primary cytopathologic effect. It is not clear whether T-antigen expression in vivo is sufficient to mediate anti-apoptotic effects. The negative staining results with bcl-2 suggest that the lack of apoptosis might not be due to over-expression of bcl-2 that is seen in certain malignancies.
In summary, the data from our group of selected patients show that, also in human renal transplants with ongoing PVAN, a clear distinction between early and late phase BKV infection can be made according to the expression of large T-antigen or VP1 protein. Virus-dependent effects appear to be mediated by T-antigen inhibiting p53 and thereby uncoupling the cell cycle. Nuclear enhancement goes hand in hand with the progression of the infectious cycle. Finally, virus-dependent cell death of tubular epithelial cells is necrosis and not apoptosis. Accordingly, we assume that in the inflammatory setting of PVAN, similar BKV mechanisms are operative as in certain in vitro systems.
Conflict of interest statement. None declared.
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[Abstract/Free Full Text]
Accepted in revised form: 25. 7.08
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